Rhizobium sp. JGI L8. Please read more. Project name:. Proposal Name:.
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Rhizobium sp. JGI L8. Please read more. Project name:. Proposal Name:. Project PI:. Susannah Tringe. User Program:. Program Year:. Scientific Program:. Genome Portal:. Related Projects:. FD ; SP Release Date:. Data Submission. Pairs of matching reads were removed from the dataset. The input reads have been filtered for contamination, artifacts and normalized. Avg GC Content: The input contains simulated kb read pairs created from the Velvet assembly and reads that have been filtered for contamination, artifacts and normalized.
The Velvet optimized assemblies were performed using reads that have been filtered for contamination, artifact and normalized. These assemblies were chosen based on the best kmer based on largest contig lengths and varying coverage cutoffs. Removed contamination human contaminants. Removed illumina artifacts synthetic oligos used in the laboratory. Normalized read coverage. Created simulated kb read pairs using velvet contigs from step 4.
Merged velvet contigs with allpaths contigs from step 6 and select only unique sequences. The work conducted by the U. Department of Energy under Contract No.
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2012, Number 1